From the very beginning of my scientific journey, I have been drawn by the potential of novel methodologies in fostering groundbreaking discoveries. Among these transformative techniques, single-cell genomics stands out as a trailblazer, revolutionizing our comprehension of cellular variability in both health and disease. As the head of the Single-cell Analytics Innovation Lab (SAIL) at Memorial Sloan Kettering Cancer Center (MSK), I am dedicated to empowering the research community through the integration and advancement of state-of-the-art single-cell and spatial methods.
2020-present: Director, Single-cell Analytics Innovation Lab, Sloan Kettering Institute, MSK, NY, USA
2016-2020: Postdoctoral Research Fellow, Dr. Dan Avi Landau, Weill Cornell Medicine, NY, USA
2010-2015: Postdoctoral Research Fellow, Dr. Edith Heard, Institut Curie, Paris, France
2006-2009: Doctoral student, Dr. William Vainchenker, Institut Gustave Roussy, Villejuif, France
Nature . 2022 Apr;604(7905):354-361.
Joshua M Weiss, Miranda V Hunter, Nelly M Cruz, Arianna Baggiolini, Mohita Tagore, Yilun Ma, Sandra Misale, Michelangelo Marasco, Theresa Simon-Vermot, Nathaniel R Campbell, Felicity Newell, James S Wilmott, Peter A Johansson, John F Thompson, Georgina V Long, John V Pearson, Graham J Mann, Richard A Scolyer, Nicola Waddell, Emily D Montal, Ting-Hsiang Huang, Philip Jonsson, Mark T A Donoghue, Christopher C Harris, Barry S Taylor, Tianhao Xu, Ronan Chaligné, Pavel V Shliaha, Ronald Hendrickson, Achim A Jungbluth, Cecilia Lezcano, Richard Koche, Lorenz Studer, Charlotte E Ariyan, David B Solit, Jedd D Wolchok, Taha Merghoub, Neal Rosen, Nicholas K Hayward, Richard M White
Science . 2022 Sep 9;377(6611):1180-1191.
Joseph M Chan, Samir Zaidi, Jillian R Love, Jimmy L Zhao, Manu Setty, Kristine M Wadosky, Anuradha Gopalan, Zi-Ning Choo, Sitara Persad, Jungmin Choi, Justin LaClair, Kayla E Lawrence, Ojasvi Chaudhary, Tianhao Xu, Ignas Masilionis, Irina Linkov, Shangqian Wang, Cindy Lee, Afsar Barlas, Michael J Morris, Linas Mazutis, Ronan Chaligne, Yu Chen, David W Goodrich, Wouter R Karthaus, Dana Pe'er, Charles L Sawyers
Nat Cancer . 2022 Nov;3(11):1367-1385.
Francisco M. Barriga, Kaloyan M. Tsanov, Yu-Jui Ho, Noor Sohail, Amy Zhang, Timour Baslan, Alexandra N. Wuest, Isabella Del Priore, Brigita Meškauskaitė, Geulah Livshits, Direna Alonso-Curbelo, Janelle Simon, Almudena Chaves-Perez, Dafna Bar-Sagi, Christine A. Iacobuzio-Donahue, Faiyaz Notta, Ronan Chaligne, Roshan Sharma, Dana Pe’er & Scott W. Lowe
Sci Transl Med . 2022 May 25;14(646):eabj2829.
Hana Andrlová, Oriana Miltiadous, Anastasia I Kousa, Anqi Dai, Susan DeWolf, Sara Violante, Hee-Yon Park, Sudha Janaki-Raman, Rui Gardner, Sary El Daker, John Slingerland, Paul Giardina, Annelie Clurman, Antonio L C Gomes, Chi Nguyen, Marina Burgos da Silva, Gabriel K Armijo, Nicole Lee, Roberta Zappasodi, Ronan Chaligne, Ignas Masilionis, Emily Fontana, Doris Ponce, Christina Cho, Amy Bush, Lauren Hill, Nelson Chao, Anthony D Sung, Sergio Giralt, Esther H Vidal, Kinga K Hosszu, Sean M Devlin, Jonathan U Peled, Justin R Cross, Miguel-Angel Perales, Dale I Godfrey, Marcel R M van den Brink, Kate A Markey
Nat Biotechnol . 2023 Mar 27. doi: 10.1038/s41587-023-01716-9.
Sitara Persad, Zi-Ning Choo, Christine Dien, Noor Sohail, Ignas Masilionis, Ronan Chaligné, Tal Nawy, Chrysothemis C. Brown, Roshan Sharma, Itsik Pe’er, Manu Setty & Dana Pe’er
Cancer Res . 2022 Oct 4;82(19):3549-3560.
Kenneth L Pitter, Olivera Grbovic-Huezo, Simon Joost, Anupriya Singhal, Melissa Blum, Katherine Wu, Matilda Holm, Alexander Ferrena, Arjun Bhutkar, Anna Hudson, Nicolas Lecomte, Elisa de Stanchina, Ronan Chaligne, Christine A Iacobuzio-Donahue, Dana Pe'er, Tuomas Tammela
Nature. 2025 Jul;643(8073):1087-1096.
Jan Remsik, Xinran Tong, Russell Z Kunes, Min Jun Li, Rachel Estrera, Jenna Snyder, Clark Thomson, Ahmed M Osman, Kiana Chabot, Ugur T Sener, Jessica A Wilcox, Danielle Isakov, Helen Wang, Tejus A Bale, Ronan Chaligné, Joseph C Sun, Chrysothemis Brown, Dana Pe'er, Adrienne Boire